Nicolas Rougier

Publications

• A dynamical computational model of theta generation in hippocampal circuits to study theta-gamma oscillations during neurostimulation
  Nikolaos Vardalakis, Amélie Aussel, Nicolas P. Rougier, Fabien B. Wagner.
  eLife. 2023-02-14.
  10.7554/eLife.87356.3
• Numpy tutorial
  .
  . .
  10.5281/zenodo.28817
• Attractor Dynamics Drive Flexible Timing in Birdsong
  Fjola Hyseni, Nicolas P. Rougier, Arthur Leblois.
  Artificial Neural Networks and Machine Learning – ICANN 2023. 2023-01-01. : 112-123.
  10.1007/978-3-031-44198-1_10
• Dual pathway architecture underlying vocal learning in songbirds
  Remya Sankar, Arthur Leblois, Nicolas P. Rougier.
  Preprint bioRxiv. 2022-04-03.
  10.1101/2022.04.02.486814
• Create Efficient and Complex Reservoir Computing Architectures with ReservoirPy
  Nathan Trouvain, Nicolas Rougier, Xavier Hinaut.
  From Animals to Animats 16. 2022-01-01. : 91-102.
  10.1007/978-3-031-16770-6_8
• Computational benefits of structural plasticity, illustrated in songbirds.
  Remya Sankar, Nicolas P. Rougier, Arthur Leblois.
  Neuroscience & Biobehavioral Reviews. 2022-01-01. 132 : 1183-1196.
  10.1016/j.neubiorev.2021.10.033
• Knowledge extraction from the learning of sequences in a long short term memory (LSTM) architecture
  Ikram Chraibi Kaadoud, Nicolas Rougier, Frédéric Alexandre.
  Knowledge-Based Systems. 2021-10-01. : 107657.
  10.1016/j.knosys.2021.107657
• High-performance interactive scientific visualization with DatoViz via the Vulkan low-level GPU API
  Cyrille Rossant, Nicolas P. Rougier.
  Authorea. 2021-05-17.
  10.22541/au.162129047.76547134/v1
• Randomized Self-Organizing Map
  Nicolas P. Rougier, Georgios Is. Detorakis.
  Neural Computation. 2021-07-26. 33(8) : 2241-2273.
  10.1162/neco_a_01406
• The adaptive value of probability distortion and risk-seeking in macaques’ decision-making
  A. Nioche, N. P. Rougier, M. Deffains, S. Bourgeois-Gironde, S. Ballesta, T. Boraud.
  Phil. Trans. R. Soc. B. 2021-01-11. 376(1819) : 20190668.
  10.1098/rstb.2019.0668
• Identification of distinct pathological signatures induced by patient-derived α-synuclein structures in nonhuman primates
  M. Bourdenx, A. Nioche, S. Dovero, M.-L. Arotcarena, S. Camus, G. Porras, M.-L. Thiolat, N. P. Rougier, A. Prigent, P. Aubert, S. Bohic, C. Sandt, F. Laferrière, E. Doudnikoff, N. Kruse, B. Mollenhauer, S. Novello, M. Morari, T. Leste-Lasserre, I. Trigo Damas, M. Goillandeau, C. Perier, C. Estrada, N. Garcia-Carrillo, A. Recasens, N. N. Vaikath, O. M. A. El-Agnaf, M. T. Herrero, P. Derkinderen, M. Vila, J. A. Obeso, B. Dehay, E. Bezard.
  Sci. Adv.. 2020-05-01. 6(20) : eaaz9165.
  10.1126/sciadv.aaz9165
• New journal for reproduction and replication results
  Etienne B. Roesch, Nicolas Rougier.
  Nature. 2020-05-01. 581(7806) : 30-30.
  10.1038/d41586-020-01328-2
• Coordination over a unique medium of exchange under information scarcity
  Aurélien Nioche, Basile Garcia, Germain Lefebvre, Thomas Boraud, Nicolas P. Rougier, Sacha Bourgeois-Gironde.
  Palgrave Commun. 2019-12-01. 5(1)
  10.1057/s41599-019-0362-2
• Identification of distinct pathological signatures induced by patient-derived α-synuclein structures in non-human primates
  M. Bourdenx, A. Nioche, S. Dovero, M.-L. Arotcarena, S. Camus, G. Porras, M.-L. Thiolat, N. P. Rougier, A. Prigent, P. Aubert, S. Bohic, C. Sandt, F. Laferrière, E. Doudnikoff, N. Kruse, B. Mollenhauer, S. Novello, M. Morari, T. Leste-Lasserre, I. Trigo Damas, M. Goillandeau, C. Perier, C. Estrada, N. Garcia-Carrillo, A. Recasens, N. N. Vaikath, O. M. A. El-Agnaf, M. Trinidad Herrero, P. Derkinderen, M. Vila, J. A. Obeso, B. Dehay, E. Bezard.
  . 2019-10-31.
  10.1101/825216
• Challenge to test reproducibility of old computer code
  Konrad Hinsen, Nicolas Rougier.
  Nature. 2019-10-01. 574(7780) : 634-634.
  10.1038/d41586-019-03296-8
• A Robust Model of Gated Working Memory
  Anthony Strock, Xavier Hinaut, Nicolas P. Rougier.
  . 2019-03-28.
  10.1101/589564
• ReScience C: A Journal for Reproducible Replications in Computational Science
  Nicolas P. Rougier, Konrad Hinsen.
  Reproducible Research in Pattern Recognition. 2019-01-01. : 150-156.
  10.1007/978-3-030-23987-9_14
• A Computational Model of Dual Competition between the Basal Ganglia and the Cortex
  Meropi Topalidou, Daisuke Kase, Thomas Boraud, Nicolas P. Rougier.
  eNeuro. 2018-12-12. : ENEURO.0339-17.2018.
  10.1523/ENEURO.0339-17.2018
• A natural history of skills
  Thomas Boraud, Arthur Leblois, Nicolas P. Rougier.
  Progress in Neurobiology. 2018-12-01. 171 : 114-124.
  10.1016/j.pneurobio.2018.08.003
• Ten Simple Rules for Scientific Fraud & Misconduct
  Nicolas P Rougier, John Timmer.
  . 2018-11-29.
  10.7287/peerj.preprints.27395
• Using neural dynamics to switch attention
  J. Vitay, N. Rougier.
  Proceedings. 2005 IEEE International Joint Conference on Neural Networks, 2005.. .
  10.1109/IJCNN.2005.1556384
• A Distributed Computational Model of Spatial Memory Anticipation During a Visual Search Task
  Jérémy Fix, Julien Vitay, Nicolas P. Rougier.
  Anticipatory Behavior in Adaptive Learning Systems. . : 170-188.
  10.1007/978-3-540-74262-3_10
• Scipy Lecture Notes
  .
  . 2015-10-2.
  10.5281/zenodo.31736
• From Python to Numpy
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  . 2017-08-01.
  10.5281/zenodo.218740
• Pruning Self-Organizing Maps for Cellular Hardware Architectures
  Andres Upegui, Bernard Girau, Nicolas Rougier, Fabien Vannel, Benot Miramond.
  2018 NASA/ESA Conference on Adaptive Hardware and Systems (AHS). 2018-08-01.
  10.1109/AHS.2018.8541465
• A Simple Reservoir Model of Working Memory with Real Values
  Anthony Strock, Nicolas P. Rougier, Xavier Hinaut.
  2018 International Joint Conference on Neural Networks (IJCNN). 2018-07-01.
  10.1109/IJCNN.2018.8489262
• Code reviewing puts extra demands on referees.
  Nicolas P. Rougier, Konrad Hinsen.
  Nature. 2018-04-01. 556(7701) : 309-309.
  10.1038/d41586-018-04628-w
• A Density-Driven Method for the Placement of Biological Cells Over Two-Dimensional Manifolds.
  Nicolas P. Rougier.
  Front. Neuroinform.. 2018-03-20. 12
  10.3389/fninf.2018.00012
• Re-run, Repeat, Reproduce, Reuse, Replicate: Transforming Code into Scientific Contributions.
  Fabien C. Y. Benureau, Nicolas P. Rougier.
  Front. Neuroinform.. 2018-01-04. 11
  10.3389/fninf.2017.00069
• Digital typography
  Nicolas P. Rougier, Behdad Esfahbod.
  ACM SIGGRAPH 2018 Courses on - SIGGRAPH '18. 2018-01-01.
  10.1145/3214834.3214837
• Sustainable computational science: The ReScience Initiative
  Nicolas P. Rougier, Konrad Hinsen, Frédéric Alexandre, Thomas Arildsen, Lorena A. Barba, Fabien C.Y. Benureau, C. Titus Brown, Pierre de Buyl, Ozan Caglayan, Andrew P. Davison, Marc-André Delsuc, Georgios Detorakis, Alexandra K. Diem, Damien Drix, Pierre Enel, Benoît Girard, Olivia Guest, Matt G. Hall, Rafael N. Henriques, Xavier Hinaut, Kamil S. Jaron, Mehdi Khamassi, Almar Klein, Tiina Manninen, Pietro Marchesi, Daniel McGlinn, Christoph Metzner, Owen Petchey, Hans Ekkehard Plesser, Timothée Poisot, Karthik Ram, Yoav Ram, Etienne Roesch, Cyrille Rossant, Vahid Rostami, Aaron Shifman, Joseph Stachelek, Marcel Stimberg, Frank Stollmeier, Federico Vaggi, Guillaume Viejo, Julien Vitay, Anya E. Vostinar, Roman Yurchak, Tiziano Zito.
  PeerJ Computer Science. 2017-12-18. 3 : e142.
  10.7717/peerj-cs.142
• Modeling the Role of Striatum in Stochastic Multi Context Tasks
  Sabyasachi Shivkumar, V. Srinivasa Chakravarthy, Nicolas P. Rougier.
  . 2017-09-30.
  10.1101/196543
• Dual Competition between the Basal Ganglia and the Cortex: from Action-Outcome to Stimulus-Response
  Meropi Topalidou, Daisuke Kase, Thomas Boraud, Nicolas P Rougier.
  . 2017-09-13.
  10.1101/187294
• Motivated self-organization
  Nicolas P. Rougier, Yann Boniface.
  2017 12th International Workshop on Self-Organizing Maps and Learning Vector Quantization, Clustering and Data Visualization (WSOM). 2017-06-01.
  10.1109/WSOM.2017.8020000
• The art of scaling up : AA computational account on action selection in basal ganglia
  Bhargav Teja Nallapu, Bapi Raju Surampudi, Nicolas P. Rougier.
  2017 International Joint Conference on Neural Networks (IJCNN). 2017-05-01.
  10.1109/IJCNN.2017.7965835
• Implicit Knowledge Extraction and Structuration from Electrical Diagrams
  Ikram Chraibi Kaadoud, Nicolas Rougier, Frederic Alexandre.
  Advances in Artificial Intelligence: From Theory to Practice. 2017-01-01. : 235-241.
  10.1007/978-3-319-60042-0_27
• One critic, two actors: Evidence for covert learning in the basal ganglia
  Meropi Topalidou, Daisuke Kase, Thomas Boraud, Nicolas P. Rougier.
  . 2016-06-23.
  10.1101/060236
• The globus pallidus pars interna in goal-oriented and routine behaviors: Resolving a long-standing paradox.
  Camille Piron, Daisuke Kase, Meropi Topalidou, Michel Goillandeau, Hugues Orignac, Tho-Haï N'Guyen, Nicolas Rougier, Thomas Boraud.
  Mov Disord.. 2016-02-22. 31(8) : 1146-1154.
  10.1002/mds.26542
• Dynamics of Reward Based Decision Making: A Computational Study
  Bhargav Teja Nallapu, Nicolas P. Rougier.
  Artificial Neural Networks and Machine Learning – ICANN 2016. 2016-01-01. : 322-329.
  10.1007/978-3-319-44778-0_38
• A parsimonious computational model of visual target position encoding in the superior colliculus
  Wahiba Taouali, Laurent Goffart, Frédéric Alexandre, Nicolas P. Rougier.
  Biol Cybern. 2015-09-05. 109(4-5) : 549-559.
  10.1007/s00422-015-0660-8
• A Long Journey into Reproducible Computational Neuroscience
  Meropi Topalidou, Arthur Leblois, Thomas Boraud, Nicolas P. Rougier.
  Front. Comput. Neurosci.. 2015-03-05. 9
  10.3389/fncom.2015.00030
• Ten Simple Rules for Better Figures
  Nicolas P. Rougier, Michael Droettboom, Philip E. Bourne.
  PLoS Comput Biol. 2014-09-11. 10(9) : e1003833.
  10.1371/journal.pcbi.1003833
• Structure of receptive fields in a computational model of area 3b of primary sensory cortex
  Georgios Is. Detorakis, Nicolas P. Rougier.
  Front. Comput. Neurosci.. 2014-07-28. 8
  10.3389/fncom.2014.00076
• Numerical simulation scheme of one-and two-dimensional neural fields involving space-dependent delays
  Axel Hutt, Nicolas Rougier.
  Neural Fields. 2014-01-01. : 175-185.
  10.1007/978-3-642-54593-1_6
• Self-Organizing Dynamic Neural Fields
  Nicolas P. Rougier, Georgios Is. Detorakis.
  Advances in Cognitive Neurodynamics (III). 2013-01-01. : 281-288.
  10.1007/978-94-007-4792-0_38
• DANA: Distributed numerical and adaptive modelling framework
  Nicolas P. Rougier, Jérémy Fix.
  Network: Computation in Neural Systems. 2012-09-20. 23(4) : 237-253.
  10.3109/0954898X.2012.721573
• A Neural Field Model of the Somatosensory Cortex: Formation, Maintenance and Reorganization of Ordered Topographic Maps
  Georgios Is. Detorakis, Nicolas P. Rougier.
  PLoS ONE. 2012-07-12. 7(7) : e40257.
  10.1371/journal.pone.0040257
• Visual Target Selection Emerges from a Bio-inspired Network Topology
  Wahiba Taouali, Nicolas Rougier, Frédéric Alexandre.
  Studies in Computational Intelligence. 2012-01-01. : 317-330.
  10.1007/978-3-642-27534-0_21
• Synchronous and asynchronous evaluation of dynamic neural fields
  N. P. Rougier, A. Hutt.
  Journal of Difference Equations and Applications. 2011-08-01. 17(8) : 1119-1133.
  10.1080/10236190903051575
• Dynamic self-organising map
  Nicolas Rougier, Yann Boniface.
  Neurocomputing. 2011-05-01. 74(11) : 1840-1847.
  10.1016/j.neucom.2010.06.034
• No clock to rule them all
  Wahiba Taouali, Thierry Viéville, Nicolas P. Rougier, Frédéric Alexandre.
  Journal of Physiology-Paris. 2011-01-01. 105(1-3) : 83-90.
  10.1016/j.jphysparis.2011.08.005
• Neural Fields and Cortical Plasticity
  Rougier Nicolas.
  Front. Comput. Neurosci.. 2011-01-01. 5
  10.3389/conf.fncom.2011.53.00226
• A Dynamic Neural Field Approach to the Covert and Overt Deployment of Spatial Attention
  Jeremy Fix, Nicolas Rougier, Frederic Alexandre.
  Cogn Comput. 2010-11-12. 3(1) : 279-293.
  10.1007/s12559-010-9083-y
• Activity spread and breathers induced by finite transmission speeds in two-dimensional neural fields
  Axel Hutt, Nicolas Rougier.
  Phys. Rev. E. 2010-11-12. 82(5)
  10.1103/PhysRevE.82.055701
• Implicit and explicit representations
  Nicolas P. Rougier.
  Neural Networks. 2009-03-01. 22(2) : 155-160.
  10.1016/j.neunet.2009.01.008
• Asynchronous evaluation as an efficient and natural way to compute neural networks
  Wahiba Taouali, Frédéric Alexandre, Axel Hutt, Nicolas P. Rougier, Theodore E. Simos, George Psihoyios, Ch. Tsitouras.
  AIP Conference Proceedings. 2009-01-01.
  10.1063/1.3241522
• From physiological principles to computational models of the cortex
  Jeremy Fix, Nicolas Rougier, Frederic Alexandre.
  Journal of Physiology-Paris. 2007-01-01. 101(1-3) : 32-39.
  10.1016/j.jphysparis.2007.10.009
• A Computational Model of Spatial Memory Anticipation during Visual Search
  .
  Lecture Notes in Computer Science. 2007-01-01.
  10.1007/978-3-540-74262-3
• Emergence of attention within a neural population
  Nicolas P. Rougier, Julien Vitay.
  Neural Networks. 2006-06-01. 19(5) : 573-581.
  10.1016/j.neunet.2005.04.004
• Dynamic neural field with local inhibition
  Nicolas P. Rougier.
  Biol Cybern. 2005-12-10. 94(3) : 169-179.
  10.1007/s00422-005-0034-8
• Prefrontal cortex and flexible cognitive control: Rules without symbols
  N. P. Rougier, D. C. Noelle, T. S. Braver, J. D. Cohen, R. C. O'Reilly.
  Proceedings of the National Academy of Sciences. 2005-05-09. 102(20) : 7338-7343.
  10.1073/pnas.0502455102
• A Distributed Model of Spatial Visual Attention
  Julien Vitay, Nicolas P. Rougier, Frédéric Alexandre.
  Biomimetic Neural Learning for Intelligent Robots. 2005-01-01. : 54-72.
  10.1007/11521082_4
• A distributed model of visual spatial attention
  N. Rougier.
  Lecture Notes in Computer Science. 2005-01-01.
  10.1007/b139051
• Learning representations in a gated prefrontal cortex model of dynamic task switching
  Nicolas P. Rougier, Randall C. O'Reilly.
  Cognitive Science. 2002-07-01. 26(4) : 503-520.
  10.1207/s15516709cog2604_4
• Integration of Biologically Inspired Temporal Mechanisms into a Cortical Framework for Sequence Processing
  Hervé Frezza-Buet, Nicolas Rougier, Frédéric Alexandre.
  Sequence Learning. 2000-01-01. : 321-348.
  10.1007/3-540-44565-x_15